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Vancouver Bioinformatics Users Group

VanBUG (Vancouver Bioinformatics Users Group) is an association of researchers, other professionals and students in the B.C. Lower Mainland who have an interest in the field of bioinformatics.

VanBUG meets on the second Thursday of every month from September through April. Research presentations by bioinformatics leaders, students and industry representatives are followed by networking over pizza and refreshments

Meetings are held in the Gordon and Leslie Diamond Family Theatre, BC Cancer Research Centre, 675 West 10th Avenue at 6:00 pm and are free and open to all.

As a service to the community, other bioinformatics events are posted to the Calendar
Visit our sister groups for bioinformatics events in Montreal (MonBUG) and now Toronto (TorBUG)!

next speakers:


David Clarke

Download Seminar PosterPDF

Talk Title:
“The systems biology of cell signal transduction”

Date/Time:
Thursday, October 9, 2014. 6:00pm

Affiliation:
Assistant Professor, Dept. of Biomedical Physiology and Kinesiology, SFU

URL: David Clarke

Bio:
David Clarke has Bachelor’s and Master’s degrees in kinesiology (Laurentian, Waterloo) and a Ph.D. in chemical and biological engineering (University of Colorado at Boulder). He conducted postdoctoral research in the laboratory of Douglas Lauffenburger (Biological Engineering, MIT) in collaboration with scientists at the US Army Research Institute for Environmental Medicine. He joined the Department of Biomedical Physiology and Kinesiology at Simon Fraser University in September 2013 where he runs a research program devoted to the quantitative analysis of exercise stress.

Abstract:
Receptor-mediated signal transduction pathways promote cellular homeostasis by sensing local environmental conditions, integrating this information, and determining the subsequent adaptations. Mutations within these pathways lead to diseases such as cancer, such that it is of biomedical importance to understand and predict their behaviours. Predicting their behaviour is challenging because of their complexity, which stems from the number of components and their interconnections into a network. In this talk, I will describe methods used to address this complexity, emphasizing different modeling algorithms and proteomics and imaging data, which are used to investigate signaling downstream of inflammation and physiological stressors. In doing so, my talk will highlight the statistical and mechanistic modeling side of bioinformatics.

Please note:
Trainees are invited to meet with the VanBUG speaker for open discussion of both science and career paths. This takes place 4:30-5:30pm in either the Boardroom or Lunchroom on the ground floor of the BCCRC

Recommended Readings

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Introductory Speaker:
Shaun Jackman (Dr. Birol’s Lab, the Genome Sciences Centre)

Title:
“Open, reproducible science using Make, RMarkdown and Pandoc”






To view previous VanBUG posters and presentations, please see Archives

sponsored by:

CIHR Bioinformatics Training Program
      PIMS

Canadian Bioinformatics Workshops

Genome BC

Proof Centre
BCCDC

past sponsors:

MITACS
 

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